3D structure

PDB id
4U26 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
UGAAUCCAUAG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4U26_037 not in the Motif Atlas
Homologous match to HL_5J7L_138
Geometric discrepancy: 0.0715
The information below is about HL_5J7L_138
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_68257.1
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
2

Unit IDs

4U26|1|BA|U|158
4U26|1|BA|G|159
4U26|1|BA|A|160
4U26|1|BA|A|161
4U26|1|BA|U|162
4U26|1|BA|C|163
4U26|1|BA|C|164
4U26|1|BA|A|165
4U26|1|BA|U|166
4U26|1|BA|A|167
4U26|1|BA|G|168

Current chains

Chain BA
23S rRNA

Nearby chains

Chain BX
50S ribosomal protein L28

Coloring options:


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