HL_4U26_115

3D structure

PDB id

4U26 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

AGUUAAUACCU

Length

11 nucleotides

Bulged bases

4U26|1|CA|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U26_115 not in the Motif Atlas

Geometric match to HL_4TUE_219

Geometric discrepancy: 0.3971

The information below is about HL_4TUE_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4U26|1|CA|A|461
4U26|1|CA|G|462
4U26|1|CA|U|463
4U26|1|CA|U|464
4U26|1|CA|A|465
4U26|1|CA|A|466
4U26|1|CA|U|467
4U26|1|CA|A|468
4U26|1|CA|C|469
4U26|1|CA|C|470
4U26|1|CA|U|471

Current chains

Chain CA

16S rRNA

Nearby chains