3D structure

PDB id
4U3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of Anisomycin bound to the yeast 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CAUUUG
Length
6 nucleotides
Bulged bases
4U3M|1|6|U|1362, 4U3M|1|6|U|1363
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4U3M_215 not in the Motif Atlas
Homologous match to HL_4V88_216
Geometric discrepancy: 0.2025
The information below is about HL_4V88_216
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_36540.1
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
2

Unit IDs

4U3M|1|6|C|1359
4U3M|1|6|A|1360
4U3M|1|6|U|1361
4U3M|1|6|U|1362
4U3M|1|6|U|1363
4U3M|1|6|G|1364

Current chains

Chain 6
18S rRNA

Nearby chains

Chain c6
40S ribosomal protein S16-A
Chain c9
40S ribosomal protein S19-A
Chain s5
40S ribosomal protein S5

Coloring options:


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