Motif HL_36540.1 Version HL_36540.1 of this group appears in releases 3.89 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V88_216 | 4V88 | 0.0000 | 0 | A6 | SSU rRNA | C | 1359 | A | 1360 | U | 1361 | U | 1362 | U | 1363 | G | 1364 | cWW |
| 2 | HL_2Y9H_007 | 2Y9H | 0.5444 | 0 | N | RNA (19-mer) | C | 11 | G | 12 | C | 13 | G | 14 | U | 15 | G | 16 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUUUG | 1 |
| CGCGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUU | 1 |
| GCGU | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.54 | Avg 0.27 | Max 0.54
Coloring options: