HL_4UG0_078
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 4UG0|1|L8|A|82, 4UG0|1|L8|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UG0_078 not in the Motif Atlas
- Homologous match to HL_8C3A_075
- Geometric discrepancy: 0.5616
- The information below is about HL_8C3A_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07882.1
- Basepair signature
- cWW-F-F-tSH-tHS-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4UG0|1|L8|G|68
4UG0|1|L8|U|69
4UG0|1|L8|G|70
4UG0|1|L8|A|71
4UG0|1|L8|A|72
4UG0|1|L8|U|73
4UG0|1|L8|U|74
4UG0|1|L8|G|75
4UG0|1|L8|C|76
4UG0|1|L8|A|77
4UG0|1|L8|G|78
4UG0|1|L8|G|79
4UG0|1|L8|A|80
4UG0|1|L8|C|81
4UG0|1|L8|A|82
4UG0|1|L8|C|83
4UG0|1|L8|A|84
4UG0|1|L8|U|85
4UG0|1|L8|U|86
4UG0|1|L8|G|87
4UG0|1|L8|A|88
4UG0|1|L8|U|89
4UG0|1|L8|C|90
Current chains
- Chain L8
- 5.8S ribosomal RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LY
- 60S RIBOSOMAL PROTEIN L26
- Chain Lh
- 60S RIBOSOMAL PROTEIN L35
- Chain Lj
- 60S RIBOSOMAL PROTEIN L37
- Chain Ll
- 60S RIBOSOMAL PROTEIN L39
Coloring options: