HL_4UG0_082
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGGCCGGUACAG
- Length
- 12 nucleotides
- Bulged bases
- 4UG0|1|S2|U|76
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UG0_082 not in the Motif Atlas
- Geometric match to HL_5TBW_012
- Geometric discrepancy: 0.2492
- The information below is about HL_5TBW_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 7
Unit IDs
4UG0|1|S2|C|69
4UG0|1|S2|G|70
4UG0|1|S2|G|71
4UG0|1|S2|C|72
4UG0|1|S2|C|73
4UG0|1|S2|G|74
4UG0|1|S2|G|75
4UG0|1|S2|U|76
4UG0|1|S2|A|77
4UG0|1|S2|C|78
4UG0|1|S2|A|79
4UG0|1|S2|G|80
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain LW
- 60S RIBOSOMAL PROTEIN L24
- Chain SG
- 40S RIBOSOMAL PROTEIN S6
- Chain SY
- 40S RIBOSOMAL PROTEIN S24
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