HL_4UG0_097
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UG0_097 not in the Motif Atlas
- Homologous match to HL_4V88_206
- Geometric discrepancy: 0.2103
- The information below is about HL_4V88_206
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
4UG0|1|S2|A|957
4UG0|1|S2|G|958
4UG0|1|S2|G|959
4UG0|1|S2|U|960
4UG0|1|S2|G|961
4UG0|1|S2|A|962
4UG0|1|S2|A|963
4UG0|1|S2|A|964
4UG0|1|S2|U|965
4UG0|1|S2|U|966
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain S6
- Transfer RNA; tRNA
- Chain SF
- 40S RIBOSOMAL PROTEIN S5
- Chain SO
- 40S RIBOSOMAL PROTEIN S14
Coloring options: