HL_4UG0_113
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGCAGCGGAAGCG
- Length
- 13 nucleotides
- Bulged bases
- 4UG0|1|S6|C|17, 4UG0|1|S6|G|18, 4UG0|1|S6|G|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UG0_113 not in the Motif Atlas
- Homologous match to HL_4V9I_038
- Geometric discrepancy: 0.4017
- The information below is about HL_4V9I_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68572.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4UG0|1|S6|C|12
4UG0|1|S6|G|13
4UG0|1|S6|C|14
4UG0|1|S6|A|15
4UG0|1|S6|G|16
4UG0|1|S6|C|17
4UG0|1|S6|G|18
4UG0|1|S6|G|19
4UG0|1|S6|A|20
4UG0|1|S6|A|21
4UG0|1|S6|G|22
4UG0|1|S6|C|23
4UG0|1|S6|G|24
Current chains
- Chain S6
- HUMAN INITIATOR MET-TRNA-I
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain SO
- 40S RIBOSOMAL PROTEIN S14
Coloring options: