HL_4UG0_127
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGUCGCCGUGCCU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UG0_127 not in the Motif Atlas
- Geometric match to HL_5TBW_226
- Geometric discrepancy: 0.3586
- The information below is about HL_5TBW_226
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59342.2
- Basepair signature
- cWW-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
4UG0|1|S2|A|376
4UG0|1|S2|G|377
4UG0|1|S2|U|378
4UG0|1|S2|C|379
4UG0|1|S2|G|380
4UG0|1|S2|C|381
4UG0|1|S2|C|382
4UG0|1|S2|G|383
4UG0|1|S2|U|384
4UG0|1|S2|G|385
4UG0|1|S2|C|386
4UG0|1|S2|C|387
4UG0|1|S2|U|388
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SI
- 40S RIBOSOMAL PROTEIN S8
- Chain SL
- 40S RIBOSOMAL PROTEIN S11
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