HL_4UG0_137
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGCAGAAU
- Length
- 8 nucleotides
- Bulged bases
- 4UG0|1|L5|G|4475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UG0_137 not in the Motif Atlas
- Homologous match to HL_8P9A_173
- Geometric discrepancy: 0.1373
- The information below is about HL_8P9A_173
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_46665.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4UG0|1|L5|A|4474
4UG0|1|L5|G|4475
4UG0|1|L5|C|4476
4UG0|1|L5|A|4477
4UG0|1|L5|G|4478
4UG0|1|L5|A|4479
4UG0|1|L5|A|4480
4UG0|1|L5|U|4481
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LH
- 60S RIBOSOMAL PROTEIN L9
- Chain Lm
- UBIQUITIN-60S RIBOSOMAL PROTEIN L40
Coloring options: