HL_4UJE_063
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- AAGCAGAAUU
- Length
- 10 nucleotides
- Bulged bases
- 4UJE|1|A2|G|4435
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UJE_063 not in the Motif Atlas
- Homologous match to HL_9AXU_058
- Geometric discrepancy: 0.4474
- The information below is about HL_9AXU_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34245.2
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4UJE|1|A2|A|4433
4UJE|1|A2|A|4434
4UJE|1|A2|G|4435
4UJE|1|A2|C|4436
4UJE|1|A2|A|4437
4UJE|1|A2|G|4438
4UJE|1|A2|A|4439
4UJE|1|A2|A|4440
4UJE|1|A2|U|4441
4UJE|1|A2|U|4442
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain CH
- 60S RIBOSOMAL PROTEIN L9
- Chain Cm
- UBIQUITIN-60S RIBOSOMAL PROTEIN L40
Coloring options: