HL_4UY8_038

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

ACUACGGU

Length

8 nucleotides

Bulged bases

4UY8|1|A|A|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4UY8_038 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.305

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

4UY8|1|A|A|1532
4UY8|1|A|C|1533
4UY8|1|A|U|1534
4UY8|1|A|A|1535
4UY8|1|A|C|1536
4UY8|1|A|G|1537
4UY8|1|A|G|1538
4UY8|1|A|U|1539

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains