HL_4UY8_047

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

4UY8|1|A|C|1870

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4UY8_047 not in the Motif Atlas

Homologous match to HL_5J7L_180

Geometric discrepancy: 0.3404

The information below is about HL_5J7L_180

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4UY8|1|A|C|1868
4UY8|1|A|G|1869
4UY8|1|A|C|1870
4UY8|1|A|A|1871
4UY8|1|A|A|1872
4UY8|1|A|G|1873

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains