HL_4UY8_048

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

4UY8|1|A|A|1913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4UY8_048 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.1291

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4UY8|1|A|G|1910
4UY8|1|A|U|1911
4UY8|1|A|A|1912
4UY8|1|A|A|1913
4UY8|1|A|C|1914
4UY8|1|A|U|1915
4UY8|1|A|A|1916
4UY8|1|A|U|1917
4UY8|1|A|A|1918
4UY8|1|A|A|1919
4UY8|1|A|C|1920

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains

Chain V

Transfer RNA; tRNA