HL_4UY8_072

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAGCCUGGUAG

Length

11 nucleotides

Bulged bases

4UY8|1|V|G|18, 4UY8|1|V|G|19

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_04124.1

Basepair signature

cWW-cWS-R-R-R-R-R

Number of instances in this motif group

9

Unit IDs

4UY8|1|V|C|13
4UY8|1|V|A|14
4UY8|1|V|G|15
4UY8|1|V|C|16
4UY8|1|V|C|17
4UY8|1|V|U|17|||A
4UY8|1|V|G|18
4UY8|1|V|G|19
4UY8|1|V|U|20
4UY8|1|V|A|21
4UY8|1|V|G|22

Current chains

Chain V

RNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain F

50S RIBOSOMAL PROTEIN L5