HL_4V19_040

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUAGAACAG

Length

9 nucleotides

Bulged bases

4V19|1|A|U|1556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_57089.1

Basepair signature

cWW-cSW-R-R-R-R

Number of instances in this motif group

13

Unit IDs

4V19|1|A|C|1555
4V19|1|A|U|1556
4V19|1|A|A|1557
4V19|1|A|G|1558
4V19|1|A|A|1559
4V19|1|A|A|1560
4V19|1|A|C|1561
4V19|1|A|A|1562
4V19|1|A|G|1563

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 5

MITORIBOSOMAL PROTEIN BL32M, MRPL32

Chain E

MITORIBOSOMAL PROTEIN UL3M, MRPL3

Chain R

MITORIBOSOMAL PROTEIN BL17M, MRPL17

Chain T

MITORIBOSOMAL PROTEIN BL19M, MRPL19