HL_4V49_061

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

GUGAAAAGC

Length

9 nucleotides

Bulged bases

4V49|1|B0|A|794

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V49_061 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.3897

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4V49|1|B0|G|791
4V49|1|B0|U|792
4V49|1|B0|G|793
4V49|1|B0|A|794
4V49|1|B0|A|795
4V49|1|B0|A|796
4V49|1|B0|A|797
4V49|1|B0|G|798
4V49|1|B0|C|799

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BA

50S ribosomal protein L2