HL_4V49_083

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CGAACAG

Length

7 nucleotides

Bulged bases

4V49|1|B0|C|1801

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V49_083 not in the Motif Atlas

Homologous match to HL_5J7L_179

Geometric discrepancy: 0.4351

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

4V49|1|B0|C|1797
4V49|1|B0|G|1798
4V49|1|B0|A|1799
4V49|1|B0|A|1800
4V49|1|B0|C|1801
4V49|1|B0|A|1802
4V49|1|B0|G|1803

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BA

50S ribosomal protein L2

Chain BY

50S ribosomal protein L31