HL_4V4A_060

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4V4A|1|B0|A|1081

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4A_060 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.2404

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4V4A|1|B0|C|1075
4V4A|1|B0|U|1076
4V4A|1|B0|U|1077
4V4A|1|B0|A|1078
4V4A|1|B0|G|1079
4V4A|1|B0|A|1080
4V4A|1|B0|A|1081
4V4A|1|B0|G|1082
4V4A|1|B0|C|1083
4V4A|1|B0|A|1084
4V4A|1|B0|G|1085

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BG

50S ribosomal protein L11