3D structure

PDB id
4V4A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
9.5 Å

Loop

Sequence
CGUAAUAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V4A_061 not in the Motif Atlas
Homologous match to HL_6PRV_002
Geometric discrepancy: 0.1292
The information below is about HL_6PRV_002
Detailed Annotation
GNRA wlth tandem sheared
Broad Annotation
No text annotation
Motif group
HL_98423.1
Basepair signature
cWW-F
Number of instances in this motif group
10

Unit IDs

4V4A|1|B0|C|1103
4V4A|1|B0|G|1104
4V4A|1|B0|U|1105
4V4A|1|B0|A|1106
4V4A|1|B0|A|1107
4V4A|1|B0|U|1108
4V4A|1|B0|A|1109
4V4A|1|B0|G|1110

Current chains

Chain B0
23S RIBOSOMAL RNA

Nearby chains

Chain B4
50S ribosomal protein L36
Chain BE
50S ribosomal protein L6
Chain BG
50S ribosomal protein L11

Coloring options:


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