HL_4V4A_061

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4A_061 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.1292

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

12

Unit IDs

4V4A|1|B0|C|1103
4V4A|1|B0|G|1104
4V4A|1|B0|U|1105
4V4A|1|B0|A|1106
4V4A|1|B0|A|1107
4V4A|1|B0|U|1108
4V4A|1|B0|A|1109
4V4A|1|B0|G|1110

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BE

50S ribosomal protein L6

Chain BG

50S ribosomal protein L11