HL_4V4A_072

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GUCAAUGC

Length

8 nucleotides

Bulged bases

4V4A|1|B0|U|1651

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4A_072 not in the Motif Atlas

Homologous match to HL_7A0S_041

Geometric discrepancy: 0.2508

The information below is about HL_7A0S_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_07145.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4V4A|1|B0|G|1646
4V4A|1|B0|U|1647
4V4A|1|B0|C|1648
4V4A|1|B0|A|1649
4V4A|1|B0|A|1650
4V4A|1|B0|U|1651
4V4A|1|B0|G|1652
4V4A|1|B0|C|1653

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains