HL_4V4A_095

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

4V4A|1|B0|A|2730, 4V4A|1|B0|G|2731, 4V4A|1|B0|C|2735

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4A_095 not in the Motif Atlas

Homologous match to HL_7A0S_065

Geometric discrepancy: 0.5287

The information below is about HL_7A0S_065

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

4V4A|1|B0|C|2725
4V4A|1|B0|U|2726
4V4A|1|B0|G|2727
4V4A|1|B0|A|2728
4V4A|1|B0|A|2729
4V4A|1|B0|A|2730
4V4A|1|B0|G|2731
4V4A|1|B0|C|2732
4V4A|1|B0|A|2733
4V4A|1|B0|U|2734
4V4A|1|B0|C|2735
4V4A|1|B0|U|2736
4V4A|1|B0|A|2737
4V4A|1|B0|A|2738
4V4A|1|B0|G|2739

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BE

50S ribosomal protein L6

Chain BH

50S ribosomal protein L13