HL_4V4I_101

3D structure

PDB id

4V4I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases (A, C, G, U)

1094G

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4I_101 not in the Motif Atlas

Homologous match to HL_6CZR_096

Geometric discrepancy: 0.4627

The information below is about HL_6CZR_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71554.2

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

11

Unit IDs

4V4I|1|y|G|1089
4V4I|1|y|U|1090
4V4I|1|y|U|1091
4V4I|1|y|A|1092
4V4I|1|y|A|1093
4V4I|1|y|G|1094
4V4I|1|y|U|1095
4V4I|1|y|C|1096

Current chains

Chain y

16S SMALL SUBUNIT RIBOSOMAL RNA

Nearby chains