HL_4V51_213
3D structure
- PDB id
- 4V51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 4V51|1|DA|G|2751, 4V51|1|DA|C|2755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V51_213 not in the Motif Atlas
- Homologous match to HL_7RQB_066
- Geometric discrepancy: 0.1718
- The information below is about HL_7RQB_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.7
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 8
Unit IDs
4V51|1|DA|C|2745
4V51|1|DA|U|2746
4V51|1|DA|G|2747
4V51|1|DA|A|2748
4V51|1|DA|A|2749
4V51|1|DA|A|2750
4V51|1|DA|G|2751
4V51|1|DA|C|2752
4V51|1|DA|A|2753
4V51|1|DA|U|2754
4V51|1|DA|C|2755
4V51|1|DA|U|2756
4V51|1|DA|A|2757
4V51|1|DA|A|2758
4V51|1|DA|G|2759
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain DH
- 50S RIBOSOMAL PROTEIN L6
- Chain DN
- 50S RIBOSOMAL PROTEIN L13
Coloring options: