HL_4V5B_202
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- GUGAUAUGAAC
- Length
- 11 nucleotides
- Bulged bases
- 4V5B|1|AB|U|90
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5B_202 not in the Motif Atlas
- Homologous match to HL_7A0S_002
- Geometric discrepancy: 0.5667
- The information below is about HL_7A0S_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50418.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4V5B|1|AB|G|86
4V5B|1|AB|U|87
4V5B|1|AB|G|88
4V5B|1|AB|A|89
4V5B|1|AB|U|90
4V5B|1|AB|A|91
4V5B|1|AB|U|92
4V5B|1|AB|G|93
4V5B|1|AB|A|94
4V5B|1|AB|A|95
4V5B|1|AB|C|96
Current chains
- Chain AB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain AT
- 50S RIBOSOMAL PROTEIN L23
- Chain AU
- 50S RIBOSOMAL PROTEIN L24
- Chain AX
- 50S RIBOSOMAL PROTEIN L29
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