HL_4V5E_037
3D structure
- PDB id
- 4V5E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Insights into translational termination from the structure of RF2 bound to the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GGUUCGAUUCC
- Length
- 11 nucleotides
- Bulged bases
- 4V5E|1|AW|C|56, 4V5E|1|AW|C|61
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5E_037 not in the Motif Atlas
- Homologous match to HL_4V7M_040
- Geometric discrepancy: 0.5243
- The information below is about HL_4V7M_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4V5E|1|AW|G|52
4V5E|1|AW|G|53
4V5E|1|AW|U|54
4V5E|1|AW|U|55
4V5E|1|AW|C|56
4V5E|1|AW|G|57
4V5E|1|AW|A|58
4V5E|1|AW|U|59
4V5E|1|AW|U|60
4V5E|1|AW|C|61
4V5E|1|AW|C|62
Current chains
- Chain AW
- E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BC
- 50S RIBOSOMAL PROTEIN L1
Coloring options: