HL_4V5H_021

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GAUGCAACGC

Length

10 nucleotides

Bulged bases

4V5H|1|AA|G|971

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_021 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.1826

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4V5H|1|AA|G|963
4V5H|1|AA|A|964
4V5H|1|AA|U|965
4V5H|1|AA|G|966
4V5H|1|AA|C|967
4V5H|1|AA|A|968
4V5H|1|AA|A|969
4V5H|1|AA|C|970
4V5H|1|AA|G|971
4V5H|1|AA|C|972

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AI

30S RIBOSOMAL PROTEIN S9

Chain AJ

30S RIBOSOMAL PROTEIN S10

Chain AV

Transfer RNA; tRNA