HL_4V5H_041

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

4V5H|1|BB|U|139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_041 not in the Motif Atlas

Geometric match to HL_6CK5_001

Geometric discrepancy: 0.245

The information below is about HL_6CK5_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

4V5H|1|BB|U|137
4V5H|1|BB|U|138
4V5H|1|BB|U|139
4V5H|1|BB|C|140
4V5H|1|BB|G|141
4V5H|1|BB|A|142

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BT

50S RIBOSOMAL PROTEIN L23