HL_4V5H_044

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CAACCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_044 not in the Motif Atlas

Homologous match to HL_5J7L_140

Geometric discrepancy: 0.1261

The information below is about HL_5J7L_140

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_62934.1

Basepair signature

cWW-tSH-F

Number of instances in this motif group

2

Unit IDs

4V5H|1|BB|C|225
4V5H|1|BB|A|226
4V5H|1|BB|A|227
4V5H|1|BB|C|228
4V5H|1|BB|C|229
4V5H|1|BB|G|230

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BL

50S RIBOSOMAL PROTEIN L15