HL_4V5H_052

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

4V5H|1|BB|C|490

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_052 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.1656

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4V5H|1|BB|C|487
4V5H|1|BB|G|488
4V5H|1|BB|G|489
4V5H|1|BB|C|490
4V5H|1|BB|G|491
4V5H|1|BB|A|492
4V5H|1|BB|G|493

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BS

50S RIBOSOMAL PROTEIN L22

Chain BU

50S RIBOSOMAL PROTEIN L24