HL_4V5H_089

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GUAAUCC

Length

7 nucleotides

Bulged bases

4V5H|1|BB|A|2211, 4V5H|1|BB|U|2213

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_089 not in the Motif Atlas

Homologous match to HL_5J7L_185

Geometric discrepancy: 0.2434

The information below is about HL_5J7L_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

4V5H|1|BB|G|2209
4V5H|1|BB|U|2210
4V5H|1|BB|A|2211
4V5H|1|BB|A|2212
4V5H|1|BB|U|2213
4V5H|1|BB|C|2214
4V5H|1|BB|C|2215

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B0

50S RIBOSOMAL PROTEIN L28

Chain BC

50S RIBOSOMAL PROTEIN L2