HL_4V5H_091

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

4V5H|1|BB|A|2268, 4V5H|1|BB|C|2275

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_091 not in the Motif Atlas

Homologous match to HL_7A0S_053

Geometric discrepancy: 0.3236

The information below is about HL_7A0S_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02042.1

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

12

Unit IDs

4V5H|1|BB|C|2264
4V5H|1|BB|U|2265
4V5H|1|BB|A|2266
4V5H|1|BB|A|2267
4V5H|1|BB|A|2268
4V5H|1|BB|G|2269
4V5H|1|BB|A|2270
4V5H|1|BB|G|2271
4V5H|1|BB|U|2272
4V5H|1|BB|A|2273
4V5H|1|BB|A|2274
4V5H|1|BB|C|2275
4V5H|1|BB|G|2276

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BM

50S RIBOSOMAL PROTEIN L16

Chain BY

50S RIBOSOMAL PROTEIN L27