HL_4V5H_096

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

4V5H|1|BB|A|2406

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_096 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.196

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

4V5H|1|BB|U|2404
4V5H|1|BB|G|2405
4V5H|1|BB|A|2406
4V5H|1|BB|A|2407
4V5H|1|BB|U|2408
4V5H|1|BB|G|2409
4V5H|1|BB|G|2410
4V5H|1|BB|A|2411
4V5H|1|BB|A|2412
4V5H|1|BB|G|2413

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BL

50S RIBOSOMAL PROTEIN L15