HL_4V5M_096
3D structure
- PDB id
- 4V5M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.8 Å
Loop
- Sequence
- CGUCCACAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5M_096 not in the Motif Atlas
- Homologous match to HL_7A0S_059
- Geometric discrepancy: 0.2961
- The information below is about HL_7A0S_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32735.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V5M|1|BA|C|2471
4V5M|1|BA|G|2472
4V5M|1|BA|U|2473
4V5M|1|BA|C|2474
4V5M|1|BA|C|2475
4V5M|1|BA|A|2476
4V5M|1|BA|C|2477
4V5M|1|BA|A|2478
4V5M|1|BA|G|2479
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain AY
- ELONGATION FACTOR G
- Chain B9
- 50S RIBOSOMAL PROTEIN L36
- Chain BH
- 50S RIBOSOMAL PROTEIN L6
- Chain BQ
- 50S RIBOSOMAL PROTEIN L16
- Chain BZ
- 50S RIBOSOMAL PROTEIN L25
Coloring options: