HL_4V5R_148
3D structure
- PDB id
- 4V5R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUUCGAUUCC
- Length
- 11 nucleotides
- Bulged bases
- 4V5R|1|CW|C|56
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5R_148 not in the Motif Atlas
- Homologous match to HL_4V7M_040
- Geometric discrepancy: 0.3966
- The information below is about HL_4V7M_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4V5R|1|CW|G|52
4V5R|1|CW|G|53
4V5R|1|CW|U|54
4V5R|1|CW|U|55
4V5R|1|CW|C|56
4V5R|1|CW|G|57
4V5R|1|CW|A|58
4V5R|1|CW|U|59
4V5R|1|CW|U|60
4V5R|1|CW|C|61
4V5R|1|CW|C|62
Current chains
- Chain CW
- E-SITE TRNA PHE OR P-SITE TRNA PHE
Nearby chains
- Chain D6
- 50S RIBOSOMAL PROTEIN L33
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DC
- 50S RIBOSOMAL PROTEIN L1
Coloring options: