HL_4V65_019

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4V65|1|A1|U|1030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V65_019 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.3492

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

4V65|1|A1|C|1028
4V65|1|A1|U|1029
4V65|1|A1|U|1030
4V65|1|A1|C|1031
4V65|1|A1|G|1032
4V65|1|A1|G|1033

Current chains

Chain A1

16S rRNA

Nearby chains