HL_4V65_020
3D structure
- PDB id
- 4V65 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome in the Pre-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V65_020 not in the Motif Atlas
- Homologous match to HL_4LFB_025
- Geometric discrepancy: 0.3981
- The information below is about HL_4LFB_025
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_63894.2
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
4V65|1|A1|G|1089
4V65|1|A1|U|1090
4V65|1|A1|U|1091
4V65|1|A1|A|1092
4V65|1|A1|A|1093
4V65|1|A1|G|1094
4V65|1|A1|U|1095
4V65|1|A1|C|1096
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain AB
- 30S ribosomal protein S2
- Chain AQ
- 30S ribosomal protein S21
- Chain AU
- 30S ribosomal protein S7
- Chain AW
- 30S ribosomal protein S9
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