HL_4V66_012

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GCAGCCGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V66_012 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3329

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4V66|1|A1|G|521
4V66|1|A1|C|522
4V66|1|A1|A|523
4V66|1|A1|G|524
4V66|1|A1|C|525
4V66|1|A1|C|526
4V66|1|A1|G|527
4V66|1|A1|C|528

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AD

30S ribosomal protein S12