HL_4V66_036
3D structure
- PDB id
- 4V66 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- ACCCCAUGCCGAACU
- Length
- 15 nucleotides
- Bulged bases
- 4V66|1|BA|G|41
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V66_036 not in the Motif Atlas
- Homologous match to HL_4V9F_074
- Geometric discrepancy: 0.5563
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.3
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V66|1|BA|A|34
4V66|1|BA|C|35
4V66|1|BA|C|36
4V66|1|BA|C|37
4V66|1|BA|C|38
4V66|1|BA|A|39
4V66|1|BA|U|40
4V66|1|BA|G|41
4V66|1|BA|C|42
4V66|1|BA|C|43
4V66|1|BA|G|44
4V66|1|BA|A|45
4V66|1|BA|A|46
4V66|1|BA|C|47
4V66|1|BA|U|48
Current chains
- Chain BA
- 5S rRNA
Nearby chains
- Chain B2
- 50S ribosomal protein L5
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BH
- 50S ribosomal protein L18
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