HL_4V66_091

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

4V66|1|BB|A|2660

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V66_091 not in the Motif Atlas

Geometric match to HL_2CZJ_007

Geometric discrepancy: 0.2803

The information below is about HL_2CZJ_007

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_23696.2

Basepair signature

cWW-F-F

Number of instances in this motif group

8

Unit IDs

4V66|1|BB|C|2658
4V66|1|BB|G|2659
4V66|1|BB|A|2660
4V66|1|BB|G|2661
4V66|1|BB|A|2662
4V66|1|BB|G|2663

Current chains

Chain BB

23S rRNA

Nearby chains

Chain B3

50S ribosomal protein L6