3D structure

PDB id
4V67 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of a translation termination complex formed with release factor RF2.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GGAUGCAAAC
Length
10 nucleotides
Bulged bases
4V67|1|BA|U|747, 4V67|1|BA|A|751
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V67_062 not in the Motif Atlas
Homologous match to HL_7RQB_023
Geometric discrepancy: 0.0824
The information below is about HL_7RQB_023
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_39334.6
Basepair signature
cWW-cWS-tSW-F-F
Number of instances in this motif group
6

Unit IDs

4V67|1|BA|G|744
4V67|1|BA|G|745
4V67|1|BA|A|746
4V67|1|BA|U|747
4V67|1|BA|G|748
4V67|1|BA|C|749
4V67|1|BA|A|750
4V67|1|BA|A|751
4V67|1|BA|A|752
4V67|1|BA|C|753

Current chains

Chain BA
23S RRNA

Nearby chains

Chain B5
50S ribosomal protein L32
Chain B7
50S ribosomal protein L34
Chain BE
50S ribosomal protein L3
Chain BW
50S ribosomal protein L22

Coloring options:


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