HL_4V68_006
3D structure
- PDB id
- 4V68 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.4 Å
Loop
- Sequence
- GGUAAUGGC
- Length
- 9 nucleotides
- Bulged bases
- 4V68|1|AA|G|266
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V68_006 not in the Motif Atlas
- Homologous match to HL_4LFB_006
- Geometric discrepancy: 0.094
- The information below is about HL_4LFB_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_36455.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V68|1|AA|G|259
4V68|1|AA|G|260
4V68|1|AA|U|261
4V68|1|AA|A|262
4V68|1|AA|A|263
4V68|1|AA|U|264
4V68|1|AA|G|265
4V68|1|AA|G|266
4V68|1|AA|C|267
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AQ
- 30S ribosomal protein S17
- Chain AT
- 30S ribosomal protein S20
Coloring options: