HL_4V68_041
3D structure
- PDB id
- 4V68 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.4 Å
Loop
- Sequence
- UGGCUACCUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V68_041 not in the Motif Atlas
- Homologous match to HL_7RQB_001
- Geometric discrepancy: 0.1027
- The information below is about HL_7RQB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_99167.2
- Basepair signature
- cWW-F-F-cSH-F-F
- Number of instances in this motif group
- 6
Unit IDs
4V68|1|BA|U|59
4V68|1|BA|G|60
4V68|1|BA|G|61
4V68|1|BA|C|62
4V68|1|BA|U|63
4V68|1|BA|A|64
4V68|1|BA|C|65
4V68|1|BA|C|66
4V68|1|BA|U|67
4V68|1|BA|G|68
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain B2
- 50S ribosomal protein L29
- Chain B7
- 50S ribosomal protein L34
- Chain BX
- 50S ribosomal protein L23
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