HL_4V69_049

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4V69|1|BB|A|196

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_049 not in the Motif Atlas

Geometric match to HL_4V9F_006

Geometric discrepancy: 0.1057

The information below is about HL_4V9F_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

4V69|1|BB|G|194
4V69|1|BB|A|195
4V69|1|BB|A|196
4V69|1|BB|A|197
4V69|1|BB|C|198
4V69|1|BB|A|199
4V69|1|BB|U|200
4V69|1|BB|C|201

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain BL

50S ribosomal protein L15

Chain BX

50S ribosomal protein L28