HL_4V69_051

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_051 not in the Motif Atlas

Homologous match to HL_7A0S_008

Geometric discrepancy: 0.1723

The information below is about HL_7A0S_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.1

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

13

Unit IDs

4V69|1|BB|C|246
4V69|1|BB|G|247
4V69|1|BB|G|248
4V69|1|BB|C|249
4V69|1|BB|G|250
4V69|1|BB|A|251
4V69|1|BB|G|252

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain B3

50S ribosomal protein L35

Chain BL

50S ribosomal protein L15

Chain BX

50S ribosomal protein L28