HL_4V69_063

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

4V69|1|BB|C|645

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_063 not in the Motif Atlas

Homologous match to HL_4WF9_021

Geometric discrepancy: 0.4131

The information below is about HL_4WF9_021

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V69|1|BB|U|641
4V69|1|BB|U|642
4V69|1|BB|A|643
4V69|1|BB|A|644
4V69|1|BB|C|645
4V69|1|BB|U|646
4V69|1|BB|G|647

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L33

Chain B3

50S ribosomal protein L35