HL_4V69_069

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

UGCUAACG

Length

8 nucleotides

Bulged bases

4V69|1|BB|U|958, 4V69|1|BB|C|961

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_069 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.1583

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V69|1|BB|U|955
4V69|1|BB|G|956
4V69|1|BB|C|957
4V69|1|BB|U|958
4V69|1|BB|A|959
4V69|1|BB|A|960
4V69|1|BB|C|961
4V69|1|BB|G|962

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain BA

5S ribosomal RNA; 5S rRNA

Chain BM

50S ribosomal protein L16