HL_4V69_070

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_070 not in the Motif Atlas

Homologous match to HL_7A0S_027

Geometric discrepancy: 0.4631

The information below is about HL_7A0S_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

4V69|1|BB|G|978
4V69|1|BB|A|979
4V69|1|BB|A|980
4V69|1|BB|A|981
4V69|1|BB|C|982
4V69|1|BB|A|983
4V69|1|BB|A|984
4V69|1|BB|C|985

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain BQ

50S ribosomal protein L20

Chain BZ

50S ribosomal protein L30