HL_4V69_072

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

GCGUAAUAGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_072 not in the Motif Atlas

Homologous match to HL_5J7L_212

Geometric discrepancy: 0.3523

The information below is about HL_5J7L_212

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4V69|1|BB|G|1091
4V69|1|BB|C|1092
4V69|1|BB|G|1093
4V69|1|BB|U|1094
4V69|1|BB|A|1095
4V69|1|BB|A|1096
4V69|1|BB|U|1097
4V69|1|BB|A|1098
4V69|1|BB|G|1099
4V69|1|BB|C|1100

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain AY

A/T-site tRNA Phe

Chain B4

50S ribosomal protein L36

Chain BI

50S ribosomal protein L11