HL_4V69_097

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

4V69|1|BB|A|2268, 4V69|1|BB|C|2275

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V69_097 not in the Motif Atlas

Homologous match to HL_7A0S_053

Geometric discrepancy: 0.2697

The information below is about HL_7A0S_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02042.1

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

12

Unit IDs

4V69|1|BB|C|2264
4V69|1|BB|U|2265
4V69|1|BB|A|2266
4V69|1|BB|A|2267
4V69|1|BB|A|2268
4V69|1|BB|G|2269
4V69|1|BB|A|2270
4V69|1|BB|G|2271
4V69|1|BB|U|2272
4V69|1|BB|A|2273
4V69|1|BB|A|2274
4V69|1|BB|C|2275
4V69|1|BB|G|2276

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain BM

50S ribosomal protein L16

Chain BW

50S ribosomal protein L27